BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D02SP1|AL428203
(974 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1896 0.0
>3x_Contig1593
Length = 10902
Score = 1896 bits (953), Expect = 0.0
Identities = 968/975 (99%), Gaps = 1/975 (0%)
Strand = Plus / Minus
Query: 1 gttatgtaacgtcatcttctatgaagcaaattcctctgcatctacatgtataacatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 gttatgtaacgtcatcttctatgaagcaaattcctctgcatctacatgtataacatcaat 1720
Query: 61 tgatgatcagacgttggtaggctatactcacgtgacttggaaattgtggttagtgtggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 tgatgatcagacgttggtaggctatactcacgtgacttggaaattgtggttagtgtggtt 1660
Query: 121 cctttacaatccagttgctttcacacagtgacagtaaatcttgtctgaaaacagaaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 cctttacaatccagttgctttcacacagtgacagtaaatcttgtctgaaaacagaaatag 1600
Query: 181 aagaagaaccaacgtcagtttaaagaaagtaggtacccgaaaacatttatttcaagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 aagaagaaccaacgtcagtttaaagaaagtaggtacccgaaaacatttatttcaagtctg 1540
Query: 241 attggtgaattgatatagtatatttccaggtatagttctcaactgtgaaaatagtatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 attggtgaattgatatagtatatttccaggtatagttctcaactgtgaaaatagtatccc 1480
Query: 301 cataatgcgttataatatcaatcaataaatacctttacaaaaaaagagaataatgtagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 cataatgcgttataatatcaatcaataaatacctttacaaaaaaagagaataatgtagta 1420
Query: 361 aataataaaggtggtagtattagcagtaagtactaaggcctgctgttcctatagaccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 aataataaaggtggtagtattagcagtaagtactaaggcctgctgttcctatagaccatt 1360
Query: 421 gcgtcgtttgatattgtccaataactccttcgatttaatttcattcagttcctctagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 gcgtcgtttgatattgtccaataactccttcgatttaatttcattcagttcctctagttt 1300
Query: 481 cttcttccagtaactattttcactaatgagagaatcgatggtatcgtacatatcgttaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 cttcttccagtaactattttcactaatgagagaatcgatggtatcgtacatatcgttaat 1240
Query: 541 atctttagttagctgtctcaactgttgaaacttctccttttctctttgtttcttgcgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 atctttagttagctgtctcaactgttgaaacttctccttttctctttgtttcttgcgtat 1180
Query: 601 tctgaatctcgccgacgcttctgtattctttctccgtttctctagttgtttccatatcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 tctgaatctcgccgacgcttctgtattctttctccgtttctctagttgtttccatatcag 1120
Query: 661 atcgttatcttcttctgctatgtcatctttcgttatatcagtaccaactgaatcctgttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 atcgttatcttcttctgctatgtcatctttcgttatatcagtaccaactgaatcctgttt 1060
Query: 721 atccgatatagtggtattagtagtagtggtggtggtggtctttttctcgttaccagtagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 atccgatatagtggtattagtagtagtggtggtggtggtctttttctcgttaccagtagt 1000
Query: 781 cgaagtcgctagcgatggtggcggttgtgatatttttgtgagthcattcagtttcgacag 840
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 999 cgaagtcgctagcgatggtggcggttgtgatatttttgtgagtccattcagtttcgacag 940
Query: 841 atcgccattatttacagcgttaataatatctgttgcgtt-ccactgctcacgagcaaaag 899
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 939 atcgccattatttacagcgttaataatatctgttgcgttcccactgctcacgagcaaaag 880
Query: 900 cgatasargtytcgatcccaactccgagttgttattgatcaattcatgsagctgtgtcga 959
||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 879 cgatagcagtctcgatcccaactccgagttgttattgatcaattcatgcagctgtgtcga 820
Query: 960 taaatctgatcccgg 974
|||||||||||||||
Sbjct: 819 taaatctgatcccgg 805
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8518
Number of Sequences: 1807
Number of extensions: 8518
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)